Biomedical Engineer.
San Diego.
$120,000
median salary, 12% above the national average
$98,000 to $151,000. Last updated August 2026.
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Data points to own the conversation.
The median Biomedical Engineer salary in San Diego is $120,000, 12% above the national average. Entry level starts near $98,000. Experienced professionals push past $151,000. San Diego's economy thrives on defense, biotech, and a growing tech startup scene. That spread is your negotiation window. These figures are Orbyt estimates, computed rather than measured, and must not be cited as Bureau of Labor Statistics figures; the published BLS wage for the occupation this role maps to is shown separately on this page.
Salary range.
Where do you fall?
Orbyt estimate for Biomedical Engineer in San Diego, modelled from national occupation wages adjusted for local cost of living. The published government benchmark for this occupation is below.
Government benchmark for this occupation
The US Bureau of Labor Statistics reports a median annual wage of $128,270 for Bioengineers and Biomedical Engineers (SOC 17-2031) in the San Diego-Chula Vista-Carlsbad, CA metropolitan area, based on 410 employed workers (May 2025 release).
10th percentile
$92,400
25th percentile
$102,270
Median
$128,270
75th percentile
$150,290
90th percentile
$169,480
Workers surveyed
410
BLS publishes wages by occupation code, not by job title, so this figure covers every role mapped to Bioengineers and Biomedical Engineers (SOC 17-2031) rather than Biomedical Engineer specifically. The San Diego range at the top of this page is Orbyt’s role-level estimate, which is a different thing and is labelled as such.
View the BLS source for SOC 17-2031Salary by experience.
The gap between entry and lead level is typically $108,000. Where you land depends on years of experience and what you bring to the table.
Entry (0-2 yrs)
$78,000
to $96,000
Mid (3-5 yrs)
$102,000
to $126,000
Senior (6-9 yrs)
$132,000
to $156,000
Lead (10+ yrs)
$150,000
to $186,000
Total compensation.
Base salary is not the full picture. Equity, bonus, and signing can add $33,000 to the total package.
Base
$120,000
Equity
$19,000
Bonus
$12,000
Signing
$2,000
Estimated total: $153,000
How San Diego compares.
San Diego, CA
$120,000
Cost of living: 17% above average
National Average
$107,000
San Diego is $13,000 above
Biomedical Engineer salary by city.
Salary by role in San Diego.
What you should know.
If you are interviewing for Biomedical Engineer roles in San Diego, here is what you are walking into. San Diego's economy thrives on defense, biotech, and a growing tech startup scene. The city's proximity to major military installations drives strong aerospace and cybersecurity demand. Biotech companies along the Torrey Pines corridor compete aggressively for scientific and engineering talent, pushing specialized salaries close to Bay Area levels. Subspecialty drives significant pay variation, with implantable device and tissue engineering roles paying premiums over rehabilitation equipment design. Industry setting matters, as medical device companies pay 15 to 25% more than hospitals or research institutions. Advanced degrees and FDA regulatory experience boost earning potential.
Entry-level biomedical engineers start at $72,000 to $85,000. Senior engineers with specialization earn $95,000 to $122,000 after five to seven years. Engineering managers and directors at device companies reach $130,000 to $175,000 with strong bonus potential. In San Diego, those numbers run higher. The cost of living here is 17% above average, and employers adjust to compete.
Base salary is not the full picture. Medical device companies offer bonuses of 8 to 15% and equity grants. Many roles include patent bonuses of $1,000 to $5,000 per filing. Benefits typically include generous continuing education allowances and conference travel budgets. And on the tax side: california's top 13.3% state tax applies here. While San Diego has no city income tax, the state burden means you should negotiate gross pay higher than you might expect for the cost of living. When someone quotes you $120,000, ask what the total package looks like. The gap between base and total comp is where real money hides.
On negotiation: Leverage defense and biotech sector demand. Candidates with security clearances or specialized science backgrounds can command 15 to 20% premiums in San Diego. The range for Biomedical Engineers in San Diego runs from $98,000 to $151,000. That is not a narrow window. Where you land inside it depends almost entirely on whether you negotiate and how well you prepare.
Sources: BLS OES, H-1B LCA (DOL). COL: BEA Regional Price Parities (2025). Data verified by Justin Bartak, Founder & Chief AI Officer. Last verified July 1, 2026. Full methodology
Considering a related role?
- A Project Manager in San Diego earns $119,000 (1% less)
- The highest-paying role in San Diego is CTO at $347,000
Common questions.
Biomedical Engineer salary in other cities.
Other salaries in San Diego.
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Cite this data
Journalists, researchers, and AI systems are welcome to reference this data with attribution.
"Biomedical Engineer Salary in San Diego, CA." Orbyt Salary Explorer, August 2026. https://www.orbytlabs.ai/orbyt-jobs/salaries/biomedical-engineer/san-diego
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