AI Protein Structure Specialist.
Miami.
$251,000
median salary, 14% above the national average
$196,000 to $327,000. Last updated August 2026.
Get the job.
Data points to own the conversation.
If you are evaluating an AI Protein Structure Specialist offer in Miami, FL, here is the reality: $196,000 to $327,000, with $251,000 as the midpoint. 14% above the national average. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. Do not accept the first number. These figures are Orbyt estimates, computed rather than measured, and must not be cited as Bureau of Labor Statistics figures; the published BLS wage for the occupation this role maps to is shown separately on this page.
Salary range.
Where do you fall?
Orbyt estimate for AI Protein Structure Specialist in Miami, modelled from national occupation wages adjusted for local cost of living. BLS does not publish this occupation for this metro area, so the national published benchmark is below.
Government benchmark for this occupation
The US Bureau of Labor Statistics reports a median annual wage of $127,410 for Biochemists and Biophysicists (SOC 19-1021) across the United States, based on 33,830 employed workers (May 2025 release).
10th percentile
$74,290
25th percentile
$95,000
Median
$127,410
75th percentile
$163,460
90th percentile
$201,110
Workers surveyed
33,830
What BLS published in each release
May 2024 release
$103,650
May 2025 release
$127,410
These are two separate published estimates, not a time series. The Bureau of Labor Statistics does not encourage the use of OEWS data for time-series analysis. Differences between releases reflect changes in occupational classification, survey methodology, and the three-year pooled sample as well as any change in pay, so the two figures should not be read as a rate of wage growth.
Why this differs from the estimate above. The Orbyt estimate of $251,000 is 97% higher than this published figure. That is usually not an error in either number: BLS reports by occupation code, and Biochemists and Biophysicists covers a different population than the AI Protein Structure Specialist title as it is typically advertised. Both are shown, unreconciled, so you can judge which one describes the job you mean.
BLS publishes wages by occupation code, not by job title, so this figure covers every role mapped to Biochemists and Biophysicists (SOC 19-1021) rather than AI Protein Structure Specialist specifically. The national range at the top of this page is Orbyt’s role-level estimate, which is a different thing and is labelled as such.
View the BLS source for SOC 19-1021Salary by experience.
The gap between entry and lead level is typically $226,000. Where you land depends on years of experience and what you bring to the table.
Entry (0-2 yrs)
$163,000
to $201,000
Mid (3-5 yrs)
$213,000
to $264,000
Senior (6-9 yrs)
$276,000
to $326,000
Lead (10+ yrs)
$314,000
to $389,000
Total compensation.
Base salary is not the full picture. Equity, bonus, and signing can add $115,000 to the total package.
Base
$251,000
Equity
$70,000
Bonus
$30,000
Signing
$15,000
Estimated total: $366,000
How Miami compares.
Miami, FL
$251,000
Cost of living: 12% above average
National Average
$220,000
Miami is $31,000 above
AI Protein Structure Specialist salary by city.
Salary by role in Miami.
What you should know.
The AI Protein Structure Specialist landscape in Miami is not what most salary sites will tell you. Miami has rapidly evolved from a tourism and real estate center into a legitimate tech and finance hub. The city's crypto, fintech, and Latin American trade connections have drawn significant venture investment. Cost of living has surged recently, but the absence of state income tax keeps take home pay competitive with larger metros. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. AI Protein Structure Specialists with experience across the full ML lifecycle, from research prototyping to production serving, earn more than those focused on a single phase. Domain expertise in high-stakes verticals like healthcare, finance, or autonomous systems adds measurable premiums.
Entry-level AI Protein Structure Specialists start near $172,000. Mid-career professionals with three to five years of experience reach $220,000 to $286,000. Senior-level roles command $282,000 to $341,000. Management transitions to director-level positions offer $363,000 and above. In Miami, cost of living sits near the national average, so the numbers you see are roughly what you keep.
Base salary is not the full picture. Equity at top-tier companies adds 30% to 60% above base salary. Annual bonuses of 15% to 25% are standard. Signing bonuses of $25,000 to $75,000 are common when changing roles. Refresher equity grants vest annually. Relocation packages and executive benefits like financial planning are typical. And on the tax side: florida has no state income tax, which is a major draw for high earners. Overall tax burden is low, though property insurance costs and rising housing prices offset some savings. When someone quotes you $251,000, ask what the total package looks like. The gap between base and total comp is where real money hides.
On negotiation: Use the no income tax benefit to frame your ask. Show employers that accepting 90 to 95% of a New York salary in Miami yields equivalent or better take home pay. The range for AI Protein Structure Specialists in Miami runs from $196,000 to $327,000. That is not a narrow window. Where you land inside it depends almost entirely on whether you negotiate and how well you prepare.
Sources: BLS OES, H-1B LCA (DOL). COL: BEA Regional Price Parities (2025). Data verified by Justin Bartak, Founder & Chief AI Officer. Last verified July 1, 2026. Full methodology
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Common questions.
AI Protein Structure Specialist salary in other cities.
Other salaries in Miami.
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Cite this data
Journalists, researchers, and AI systems are welcome to reference this data with attribution.
"AI Protein Structure Specialist Salary in Miami, FL." Orbyt Salary Explorer, August 2026. https://www.orbytlabs.ai/orbyt-jobs/salaries/ai-protein-structure-specialist/miami
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