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AI Protein Structure Specialist.

Anchorage.

$239,000

median salary, 9% above the national average

$187,000 to $310,000. Last updated August 2026.

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Data points to own the conversation.

Anchorage is 13% more expensive than the national average. For AI Protein Structure Specialists, that shakes out to a median of $239,000, with the full range spanning $187,000 to $310,000. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. Know the range before you walk in. These figures are Orbyt estimates, computed rather than measured, and must not be cited as Bureau of Labor Statistics figures; the published BLS wage for the occupation this role maps to is shown separately on this page.

Salary range.

25th Percentile

$187,000

per year

Median

$239,000

per year

75th Percentile

$310,000

per year

Where do you fall?

$187,000$310,000

Orbyt estimate for AI Protein Structure Specialist in Anchorage, modelled from national occupation wages adjusted for local cost of living. BLS does not publish this occupation for this metro area, so the national published benchmark is below.

Government benchmark for this occupation

The US Bureau of Labor Statistics reports a median annual wage of $127,410 for Biochemists and Biophysicists (SOC 19-1021) across the United States, based on 33,830 employed workers (May 2025 release).

10th percentile

$74,290

25th percentile

$95,000

Median

$127,410

75th percentile

$163,460

90th percentile

$201,110

Workers surveyed

33,830

What BLS published in each release

May 2024 release

$103,650

May 2025 release

$127,410

These are two separate published estimates, not a time series. The Bureau of Labor Statistics does not encourage the use of OEWS data for time-series analysis. Differences between releases reflect changes in occupational classification, survey methodology, and the three-year pooled sample as well as any change in pay, so the two figures should not be read as a rate of wage growth.

Why this differs from the estimate above. The Orbyt estimate of $239,000 is 88% higher than this published figure. That is usually not an error in either number: BLS reports by occupation code, and Biochemists and Biophysicists covers a different population than the AI Protein Structure Specialist title as it is typically advertised. Both are shown, unreconciled, so you can judge which one describes the job you mean.

BLS publishes wages by occupation code, not by job title, so this figure covers every role mapped to Biochemists and Biophysicists (SOC 19-1021) rather than AI Protein Structure Specialist specifically. The national range at the top of this page is Orbyt’s role-level estimate, which is a different thing and is labelled as such.

View the BLS source for SOC 19-1021

Salary by experience.

The gap between entry and lead level is typically $215,000. Where you land depends on years of experience and what you bring to the table.

Entry (0-2 yrs)

$155,000

to $191,000

Mid (3-5 yrs)

$203,000

to $251,000

Senior (6-9 yrs)

$263,000

to $311,000

Lead (10+ yrs)

$299,000

to $370,000

Total compensation.

Base salary is not the full picture. Equity, bonus, and signing can add $110,000 to the total package.

Base

$239,000

Equity

$67,000

Bonus

$29,000

Signing

$14,000

Estimated total: $349,000

How Anchorage compares.

Anchorage, AK

$239,000

Cost of living: 13% above average

National Average

$220,000

Anchorage is $19,000 above

AI Protein Structure Specialist salary by city.

AI Protein Structure Specialist salary comparison across 10 cities
CityMedianRangeCOLAdjusted
San Francisco, CA$306,000$239,000 to $398,0001.35x$227,000
San Jose, CA$298,000$233,000 to $387,0001.38x$216,000
Honolulu, HI$295,000$230,000 to $383,0001.30x$227,000
New York, NY$279,000$218,000 to $362,0001.28x$218,000
Boston, MA$271,000$212,000 to $352,0001.22x$222,000
Seattle, WA$265,000$207,000 to $344,0001.24x$214,000
Washington DC, DC$264,000$206,000 to $343,0001.25x$211,000
Los Angeles, CA$262,000$205,000 to $341,0001.18x$222,000
San Diego, CA$252,000$197,000 to $328,0001.17x$215,000
Anchorage, AK$239,000$187,000 to $310,0001.13x$212,000

See all 81 cities for AI Protein Structure Specialist →

Salary by role in Anchorage.

Salary comparison by role in Anchorage
RoleMedianRange
CTO$329,000$256,000 to $427,000
CEO$317,000$231,000 to $438,000
General Counsel$307,000$239,000 to $399,000
AI Financial Engineer$242,000$179,000 to $311,000
AI Protein Structure Specialist$239,000$187,000 to $310,000
AI Risk Analytics Engineer$238,000$186,000 to $310,000
L7 Software Engineer$237,000$208,000 to $279,000
E6 Engineer$237,000$208,000 to $279,000

What you should know.

The AI Protein Structure Specialist landscape in Anchorage is not what most salary sites will tell you. Anchorage is Alaska's economic center, driven by oil and gas, military spending, and healthcare. The city offers premium pay to offset its remote location and high cost of goods. Federal and state government roles dominate, with growing demand in telehealth and energy technology. Model complexity, data pipeline scale, and infrastructure cost optimization are the primary drivers. AI Protein Structure Specialists with experience across the full ML lifecycle, from research prototyping to production serving, earn more than those focused on a single phase. Domain expertise in high-stakes verticals like healthcare, finance, or autonomous systems adds measurable premiums.

Entry-level AI Protein Structure Specialists start near $172,000. Mid-career professionals with three to five years of experience reach $220,000 to $286,000. Senior-level roles command $282,000 to $341,000. Management transitions to director-level positions offer $363,000 and above. In Anchorage, cost of living sits near the national average, so the numbers you see are roughly what you keep.

Base salary is not the full picture. Equity at top-tier companies adds 30% to 60% above base salary. Annual bonuses of 15% to 25% are standard. Signing bonuses of $25,000 to $75,000 are common when changing roles. Refresher equity grants vest annually. Relocation packages and executive benefits like financial planning are typical. And on the tax side: alaska has no state income tax and no state sales tax. Anchorage charges no local income tax either. The result is one of the lowest overall tax burdens in the nation. When someone quotes you $239,000, ask what the total package looks like. The gap between base and total comp is where real money hides.

On negotiation: Negotiate relocation packages and cost of living adjustments. Anchorage employers expect to pay 10 to 20% premiums over Lower 48 salaries for comparable roles. The range for AI Protein Structure Specialists in Anchorage runs from $187,000 to $310,000. That is not a narrow window. Where you land inside it depends almost entirely on whether you negotiate and how well you prepare.

Sources: BLS OES, H-1B LCA (DOL). COL: BEA Regional Price Parities (2025). Data verified by Justin Bartak, Founder & Chief AI Officer. Last verified July 1, 2026. Full methodology

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$

25th

$187,000

Median

$239,000

75th

$310,000

Considering a related role?

Common questions.

Production deployment experience, published research or open source contributions, and expertise with the latest model architectures command the highest premiums. Proficiency in Python, PyTorch, and cloud ML platforms is baseline. Experience with LLM fine-tuning, RLHF, and inference optimization is increasingly differentiated.

AI labs and foundation model companies pay 20% to 40% more than enterprises. Well-funded AI startups offer competitive base salaries with significant equity upside. Large tech companies provide the most stable total compensation packages with strong equity vesting schedules.

In Anchorage, large enterprises typically pay AI Protein Structure Specialists 10 to 20% more in base salary than small companies, but startups often compensate with equity that can exceed base salary value. Equity at top-tier companies adds 30% to 60% above base salary. The $187,000 to $310,000 range reflects this entire spectrum.

Alaska has no state income tax and no state sales tax. Anchorage charges no local income tax either. The result is one of the lowest overall tax burdens in the nation. When comparing offers across states, your take home pay matters more than the number on the offer letter. A lower salary in a no income tax state can net more than a higher one elsewhere.

Entry level AI Protein Structure Specialist positions in Anchorage typically start near $187,000. Candidates with relevant internships, certifications, or portfolio work often negotiate closer to the median of $239,000. Entry-level AI Protein Structure Specialists start near $172,000.

Entry-level AI Protein Structure Specialists start near $172,000. Mid-career professionals with three to five years of experience reach $220,000 to $286,000. Senior-level roles command $282,000 to $341,000. Management transitions to director-level positions offer $363,000 and above. In Anchorage, each step up the ladder is amplified by the local cost of living multiplier, which means senior roles pay proportionally more than in lower cost markets.

Ask about equity structure, vesting schedule, annual bonus targets, 401(k) match, health insurance premiums, PTO policy, and remote flexibility. Equity at top-tier companies adds 30% to 60% above base salary. In Anchorage's market, these extras can add $59,750 or more on top of the base salary.

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"AI Protein Structure Specialist Salary in Anchorage, AK." Orbyt Salary Explorer, August 2026. https://www.orbytlabs.ai/orbyt-jobs/salaries/ai-protein-structure-specialist/anchorage

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